Assoc. Prof. DENİZ SÜNNETÇİ AKKOYUNLU

Publication Network

Articles 45

1. Identification of Differentially Expressed Genes in Non-functioning Pituitary Adenoma by Transcriptome Analysis.

Uzkul N. D., Akkoyunlu D., Cabuk B., Isik E. B., Iskenderoglu E. T., Keskin S. E., et al.

In vivo (Athens, Greece) , vol.40, no.4, pp.2051-2065, 2026 (SCI-Expanded, Scopus)

2. NLRP3 and RANK-RANKL-OPG Pathway-related Gene Expression Levels in Children With Autism Spectrum Disorder

KARA B., Savas M., ÖZER T., ŞİŞMANLAR Ş. G., Akarsu R., Öztürk S. Y., et al.

In Vivo , vol.40, no.3, pp.1680-1695, 2026 (SCI-Expanded, Scopus)

3. The genetic landscape of childhood-onset dystonia in a nationwide Turkish cohort: Clinical spectrum, molecular diagnostics, and therapeutic implications

Yilmaz S., SERDAROĞLU E., Simsek E., KARA B., TÜRKDOĞAN D., YİŞ U., et al.

European Journal of Paediatric Neurology , vol.62, pp.51-60, 2026 (SCI-Expanded, Scopus)

4. Clinical and Microbial Features of Granulomatous Mastitis: Comparative Analysis of Breast and Gut Microbiota

Şimşek T., Özsaray M. F., Şahin S., Sünnetçi Akkoyunlu D., Çine N., Cantürk N. Z.

JOURNAL OF INVESTIGATIVE SURGERY , vol.38, no.1, 2025 (SCI-Expanded, Scopus)

5. Functional Abdominal Bloating Is Associated With Gut Microbiota Dysbiosis and Altered Intestinal Barrier Function: Experimental Evidence.

Akkoyunlu D., ÇELEBİ A., Gur B., KANLI A., Ugurtas C., ÖZER T., et al.

In vivo (Athens, Greece) , vol.39, no.6, pp.3320-3332, 2025 (SCI-Expanded, Scopus)

6. Genetic Etiology of Developmental and Epileptic Encephalopathy in a Turkish Cohort: A Single-Center Study with Targeted Gene Panel and Whole Exome Sequencing

Sünnetçi Akkoyunlu D., Kara B., Özer T., Deniz A., Sakarya Güneş A., Isik E. B., et al.

Genes , vol.16, no.10, 2025 (SCI-Expanded, Scopus)

7. Distinct Breast Tissue Microbiota Profiles in Early-Stage Breast Cancer: A Prospective Study in Turkish Women.

ÖZSARAY M. F., ŞİMŞEK T., Akkoyunlu D., ÇİNE N., CANTÜRK N. Z.

Life (Basel, Switzerland) , vol.15, no.10, 2025 (SCI-Expanded, Scopus)

8. Biallelic pathogenic variants in TRMT1 disrupt tRNA modification and induce a neurodevelopmental disorder

Efthymiou S., Leo C. P., Deng C., Lin S., Maroofian R., Lin R., et al.

American Journal of Human Genetics , vol.112, no.5, pp.1117-1138, 2025 (SCI-Expanded, Scopus)

9. Identification of Common miRNAs Differentially Expressed in Periodontitis and Pancreatic Cancer

Sunnetci‐Akkoyunlu D., Ugurtas C., Kulcu‐Sarikaya N., ÖZER T., ÇİNE N., Eren‐Keskin S., et al.

IN VIVO , vol.39, no.3, pp.1422-1439, 2025 (SCI-Expanded, Scopus) Sustainable Development

10. Apparent efficacy of NMDAR antagonist use as a targeted therapy for status epilepticus in an infant with ATP1A2-related developmental epileptic encephalopathy

Orgun L., Deniz A., Güneş A., Akkoyunlu D., CIRDI G., GÖK A., et al.

SEIZURE-EUROPEAN JOURNAL OF EPILEPSY , vol.126, pp.95-98, 2025 (SCI-Expanded, Scopus) Sustainable Development

11. Potential Common Molecular Mechanisms Between Periodontitis and Prostate Cancer: A Network Analysis of Differentially Expressed miRNAs

KANLI A., Sunnetci-akkoyunlu D., Kulcu-sarikaya N., Ugurtas C., AKPINAR G., KASAP M.

IN VIVO , vol.39, no.2, pp.795-809, 2025 (SCI-Expanded, Scopus) Sustainable Development

12. Therapeutic implications of etiology-specific diagnosis of early-onset developmental and epileptic encephalopathies (EO-DEEs): A nationwide Turkish cohort study

Kanmaz S., Tekgul H., Kayilioglu H., Atas Y., Kart P. O., Yildiz N., et al.

SEIZURE-EUROPEAN JOURNAL OF EPILEPSY , vol.123, pp.17-25, 2024 (SCI-Expanded, Scopus)

13. Bariatrik Cerrahi Sonrası Ortaya Çıkan Mide Adenokarsinomu: Obezite ve Mide Kanseri Arasındaki Genetik İlişkinin İncelenmesi

Şahin S., Eren Keskin S., Şahin E., Sünnetçi Akkoyunlu D., Doğruoğlu B., İlkay Z., et al.

Acta Medica Nicomedia , vol.7, no.3, pp.359-361, 2024 (TRDizin)

14. Cytogenetic evaluation of 661 prenatal samples

EREN KESKİN S., Dogruoglu B., Ilkay Z., SÜNNETÇİ AKKOYUNLU D., ÇİNE N., SAVLI H., et al.

CUKUROVA MEDICAL JOURNAL , vol.49, no.2, pp.248-259, 2024 (ESCI, TRDizin)

15. The effect of epetraborole on the transcriptome and proteome profiles of an Escherichia coli strain overexpressing leuS, Leucyl-tRNA Synthetase

BABAYEVA A., DİBEK E., SÜNNETÇİ AKKOYUNLU D., ÇİNE N., KASAP M., AKPINAR G., et al.

Frontiers in Life Sciences and Related Technologies (Online) , vol.5, no.1, pp.48-58, 2024 (TRDizin)

16. Differentially expressed miRNAs associated with generalized aggressive periodontitis

Guzeldemir-Akcakanat E., Sunnetci-Akkoyunlu D., Balta-Uysal V. M., Özer T., Işik E. B., Cine N.

CLINICAL ORAL INVESTIGATIONS , vol.28, no.1, 2024 (SCI-Expanded, Scopus) Sustainable Development

17. Integrated analysis of differentially expressed genes implicated in ovarian cancer progression Diferansiyel olarak ifade edilen genlerin entegre analizi yumurtalık kanserinin ilerlemesinde rol oynar

Gür B., Sarıkaya N., Akkoyunlu D.

Turkish Journal of Obstetrics and Gynecology , vol.20, no.4, pp.275-284, 2023 (ESCI, Scopus, TRDizin)

18. Altered expression of MZB1 in periodontitis: A possible link to disease pathogenesis

SÜNNETÇİ AKKOYUNLU D., GÜZELDEMİR AKÇAKANAT E., Alkan B., Gurel B., BALTA UYSAL V. M., Akgun E., et al.

Journal of Periodontology , vol.94, no.11, pp.1285-1294, 2023 (SCI-Expanded, Scopus)

19. INVESTIGATING GENE EXPRESSION CHANGES AND HUB GENES PLAYING A ROLE IN THE PROGRESSION OF GLIAL BRAIN TUMORS

SARIKAYA N. K., AKKOYUNLU D. S.

Acta Medica Nicomedia , vol.6, no.3, pp.380-389, 2023 (TRDizin)

20. Importance of Structural Abnormalities Detected by Array-Comparative Genomic Hybridization in Recurrent Miscarriage: A retrospective Study

Akar B., Köle E., Sünnetçi Akkoyunlu D., Çakır Köle M., Çine N., Savlı H., et al.

Adnan Menderes Üniversitesi Sağlık Bilimleri Fakültesi Dergisi , vol.7, no.3, pp.631-639, 2023 (Peer-Reviewed Journal)

21. Quantification of MMP-2 and TIMP-1 expressions in breast cancer

Keskin S., SÜNNETÇİ AKKOYUNLU D., Tezcan M. Y., ŞİMŞEK T., GÜLER S. A., ÇİNE N., et al.

ISTANBUL JOURNAL OF PHARMACY , no.2, pp.211-218, 2023 (ESCI, TRDizin)

22. The role of next-generation sequencing in the examination of signaling genes in Brca1/2-negative breast cancer cases

ÇİNE N., Ugurtas C., Gokbayrak M., AYDIN D., Demir G., Kuru S., et al.

ANNALS OF HUMAN GENETICS , vol.87, no.1-2, pp.28-49, 2023 (SCI-Expanded, Scopus)

23. Copy Number Variations in a Turkish Cohort of Children with Intellectual Disability*

SÜNNETÇİ AKKOYUNLU D., KARA B., ÇİNE N., EREN KESKİN S., Dogruoglu B., Ilkay Z., et al.

Experimed , vol.13, no.3, pp.263-275, 2023 (ESCI, Scopus, TRDizin)

24. Shared Biological Pathways and Processes in Patients with Intellectual Disability: A Multicenter Study

Günay Ç., Aykol D., Özsoy Ö., Sonmezler E., Hanci Y. S., Kara B., et al.

NEUROPEDIATRICS , vol.54, no.4, pp.225-238, 2022 (SCI-Expanded, Scopus)

25. THE MUTATION PROFILES OF K-RAS/N-RAS GENES IN METASTATIC COLORECTAL CANCER PATIENTS

KESKİN S. E., Güzdolu E., SERTDEMİR N., DEMİR G., SÜNNETÇİ D., ÇABUK D., et al.

Kocaeli Üniversitesi Sağlık Bilimleri Dergisi , vol.8, no.3, pp.172-178, 2022 (TRDizin)

26. The diagnostic importance of pathogenic variants and variant coexistence determined by NGS-based liquid biopsy approach in patients with lung adenocarcinoma

Çine N., Sen E. A., Demir G., Gokbayrak M., Guzdolu E., Sertdemir N., et al.

MOLECULAR AND CELLULAR PROBES , vol.64, 2022 (SCI-Expanded, Scopus)

27. Identification of Key Genes in Papillary Thyroid Cancer by Transcriptome Analysis

SÜNNETÇİ AKKOYUNLU D., Isik E. B., Tarkun I., ÇİNE N., CANTÜRK N. Z., Devrim Uzkul N., et al.

UHOD-ULUSLARARASI HEMATOLOJI-ONKOLOJI DERGISI , vol.30, no.1, pp.11-22, 2020 (SCI-Expanded, Scopus, TRDizin) Sustainable Development

28. TP53, EGFR and PIK3CA gene variations observed as prominent biomarkers in breast and lung cancer by plasma cell-free DNA genomic testing

SAVLI H., Sertdemir N., AYDIN D., Dursun B., KURTAŞ Ö., Reka S., et al.

JOURNAL OF BIOTECHNOLOGY , vol.300, pp.87-93, 2019 (SCI-Expanded, Scopus) Sustainable Development

29. Molecular signatures of chronic periodontitis in gingiva: A genomic and proteomic analysis

Guzeldemir-Akcakanat E., Alkan B., Sunnetci-Akkoyunlu D., Gürel B., Balta V. M., Kan B., et al.

JOURNAL OF PERIODONTOLOGY , vol.90, no.6, pp.663-673, 2019 (SCI-Expanded, Scopus)

30. Genomic copy number alteration of glycolytic pathway in endometrial cancer

Yilmaz M., Akkoyunlu D., Keskin S., DOĞER E., ÇİNE N., SAVLI H.

EUROPEAN JOURNAL OF GYNAECOLOGICAL ONCOLOGY , vol.40, no.4, pp.640-646, 2019 (SCI-Expanded, Scopus) Sustainable Development

31. Hipofiz Adenomlarının Moleküler Biyolojisi

ÇABUK B., SÜNNETÇİ AKKOYUNLU D., ANIK İ., CEYLAN S.

Türk Nöroşirurji Dergisi , vol.27, no.2, pp.185-190, 2017 (TRDizin)

32. Hipofiz adenomlarının moleküler biyolojisi

ÇABUK B., SÜNNETÇİ AKKOYUNLU D., ANIK İ., CEYLAN S.

Türk Nöroşirurji Dergisi , 2017 (Peer-Reviewed Journal)

33. Deregulated Levels of the NF-kappa B1, NF-kappa B2, and Rel Genes in Ukrainian Patients with Leukemia and Lymphoma in the Post-Chernobyl Period

SAVLI H., Akkoyunlu R. U., ÇİNE N., Gluzman D. F., Zavelevich M. P., Sklyarenko L. M., et al.

TURKISH JOURNAL OF HEMATOLOGY , vol.33, no.1, pp.8-14, 2016 (SCI-Expanded, Scopus, TRDizin) Sustainable Development

34. Gene-Expression Profiles in Generalized Aggressive Periodontitis: A Gene Network-Based Microarray Analysis

Guzeldemir-Akcakanat E., Sunnetci-Akkoyunlu D., Orucguney B., ÇİNE N., Kan B., Yilmaz E. B., et al.

JOURNAL OF PERIODONTOLOGY , vol.87, no.1, pp.58-65, 2016 (SCI-Expanded, Scopus)

35. Bortezomib and Arsenic Trioxide Activity on a Myelodysplastic Cell Line (P39): A Gene Expression Study

SAVLI H., Galimberti S., Sunnetci D., Canestraro M., Palumbo G., Nagy B., et al.

TURKISH JOURNAL OF HEMATOLOGY , vol.32, no.3, pp.206-212, 2015 (SCI-Expanded, Scopus, TRDizin)

36. A CGH array study in nonsyndromic (primary) autism patients: deletions on 16p13.11, 16p11.2, 1q21.1, 2q21.1q21.2, and 8p23.1

Gümüşlü K., Savli H., Sünnetçi D., Çine N., Kara B., Eren K., et al.

TURKISH JOURNAL OF MEDICAL SCIENCES , vol.45, no.2, pp.313-319, 2015 (SCI-Expanded, Scopus, TRDizin)

37. **Identification of ApoA1, HPX and POTEE genes by omic analysis in breast cancer**

ÇİNE N., Baykal A. T., Sunnetci D., Canturk Z., Serhatli M., SAVLI H.

ONCOLOGY REPORTS , no.3, pp.1078-1086, 2014 (SCI-Expanded, Scopus)

38. Array-CGH and clinical findings in a patient with a small supernumerary r(8) mosaicism.

Eyüpoğlu F., Sünnetçi D., Cine N., Savli H., Okten A., Açikgöz E., et al.

Genetic counseling (Geneva, Switzerland) , vol.25, pp.305-13, 2014 (SCI-Expanded, Scopus)

39. The effect of first chromosome long arm duplication on survival of endometrial carcinoma

sever e., DOĞER E., SÜNNETÇİ AKKOYUNLU D., ÇİNE N., SAVLI H., YÜCESOY İ.

J Turk Soc Obstet Gynecol , 2014 (Peer-Reviewed Journal)

40. The Antidepressant Agomelatine Improves Memory Deterioration and Upregulates CREB and BDNF Gene Expression Levels in Unpredictable Chronic Mild Stress UCMS Exposed Mice

GÜMÜŞLÜ K. E., MUTLU O., SÜNNETÇİ AKKOYUNLU D., ULAK G., KOMSUOĞLU ÇELİKYURT F. İ., ÇİNE N., et al.

Drug Target Insights , 2014 (Scopus)

41. Effects of curcumin on global gene expression profiles in the highly invasive human breast carcinoma cell line MDA-MB 231: A gene network-based microarray analysis

ÇİNE N., Limtrakul P., Sunnetci D., Nagy B., SAVLI H.

EXPERIMENTAL AND THERAPEUTIC MEDICINE , vol.5, no.1, pp.23-27, 2013 (SCI-Expanded, Scopus) Sustainable Development

42. Microarray-based gene expression analysis of an animal model for closed head injury

ÇOLAK T., Cine N., BAMAÇ B., Kurtas O., OZBEK A., BICER U., et al.

INJURY-INTERNATIONAL JOURNAL OF THE CARE OF THE INJURED , vol.43, no.8, pp.1264-1270, 2012 (SCI-Expanded, Scopus) Sustainable Development

43. The Association Between Gene Polymorphisms and Leukocytosis with Thrombotic Complications in Patients with Essential Thrombocythemia and Polycythemia Vera

MEHTAP Ö., Atesoglu E. B., TARKUN P., GONULLU E., KESKİ H., Topcu Y., et al.

TURKISH JOURNAL OF HEMATOLOGY , vol.29, no.2, pp.162-169, 2012 (SCI-Expanded, Scopus, TRDizin)

44. A case of del(13)(q14.2)(q31.3) associated with hypothyroidism, hypertriglyceridemia, hypercholesterolemia and total ophthalmoplegia

Malbora B., Meral C., Malbora N., Sunnetci D., ÇİNE N., SAVLI H.

GENE , vol.498, no.2, pp.296-299, 2012 (SCI-Expanded, Scopus)

45. GENE NETWORK AND CANONICAL PATHWAY ANALYSIS IN HEMATOPOLETIC AND SOFT TISSUE ORIGINATED MALIGNANCIES

Savli H., Cine N., Sunnetci D., Uzulmez N., Nagy B., Galimberti S., et al.

IUBMB LIFE , vol.61, no.3, pp.308, 2009 (SCI-Expanded, Scopus)

Papers Presented at Peer-Reviewed Scientific Conferences 62

1. Kalıtsal Kanser Şüphesinde Yeni Nesil Dizileme Analizinin Rolü: Germ Hattı Varyantlarının Klinik Sınıflandırması ve Genlere Göre Sıklığı

Uğurtaş C., Gökbayrak M., Aydın D., Dursun F., Özer T., Külcü Sarıkaya N., et al.

XıX. Tıbbi Biyoloji ve Genetik Kongresi, Muğla, Turkey, 27 - 30 October 2025, pp.101, (Summary Text)

2. Çoklu Primer Tümörü Olan Bir Kadında Yeni Nesil Dizileme Yöntemi ile Saptanan VHL ve NF1 Genlerinde Çift Heterozigot Mutasyonlar: Bir Olgu Sunumu

Uğurtaş C., Gökbayrak M., Aydın D., Canbaz P., Dursun F., Özer T., et al.

XıX. Tıbbi Biyoloji ve Genetik Kongresi, Muğla, Turkey, 27 - 30 October 2025, pp.132, (Summary Text)

3. Seronegatif otoimmün ensefalitte tüm ekzom analizi: Tek merkez deneyimi

Cırdı G., Özer T., Gök A., Sakarya Güneş A., Tekin Orgun L., Sünnetçi Akkoyunlu D., et al.

26. Ulusal Çocuk Nörolojisi Kongresi, Antalya, Turkey, 30 April 2025, (Summary Text)

4. Genetic Exploration of Rajab Interstitial Lung Disease With Brain Calcifications: A Case Report

Eren Keskin S., Sünnetçi Akkoyunlu D., Özer T.

18th International Medicine and Heath Sciences Researches Congress, 15 - 16 March 2025, pp.201-202, (Summary Text)

5. The importance of genetic diagnosis and targeted therapy in super refractory status in children

TEKİN ORGUN L., SAKARYA GÜNEŞ A., CIRDI G., SÜNNETÇİ AKKOYUNLU D., DENİZ A., KARA B.

15th European Epilepsy Congress, Italy, 7 - 11 September 2024, vol.65, pp.506, (Summary Text)